pipette
ENEnglish

Five-country analysis of geographic and dietary drivers of gut microbiome composition and genomic variation

Lora A. Khatib, Renee E. Oles, Alejandra Ríos Hernández, Tyler D. Myers, Jianshu Zhao, Megha Kumar, Ana Laroya, Veronica Tolosa-Enguís, Nobuko Matsunami, Daisuke Suzuki, Nodoka Chiba, Katharine E. Gilbert, Promi Das, Jon G. Sanders, Lucas Patel, Nicole Litwin, Brent Nowinski, Amanda Birmingham, Sawyer H. Farmer, Caitriona Brennan, MacKenzie M. Bryant, Caitlin Tribelhorn, Karenina Sanders-Bodai, Charles Cowart, Oliver Nizet, Edgar A. Diaz, Patrick Veiga, Sudarshan Anand Shetty, Jan Knol, Christophe Lay, Hana Koutníková, Soline Chaumont, Julien Tap, Aurélie Cotillard, Muriel Derrien, Manolo Laiola, Antonio Gonzalez, Armando Roberto Tovar, Nimbe Torres, Yolanda Sanz, Takuji Yamada, Daniel McDonald, Se Jin Song, Andrew P. Bartko, Rob Knight

Revista con revisión por pares

En palabras de los autores

Abstract Human diet and lifestyle vary widely across cultures, shaping global diversity in gut microbiome composition and function. However, comparable cross-population studies have been limited by methodological heterogeneity. The Human Diets and Microbiome Initiative (THDMI) integrates standardized recruitment, dietary assessment, and shotgun metagenomics across 1,976 participants from the United States, United Kingdom, Spain, Mexico, and Japan to disentangle biological from technical variation. We observed pronounced geographic differences in nutrient intake, food consumption, and microbial composition, with both shared and country-specific features linked to diet. Sparse canonical correlation and machine-learning analyses revealed that microbiome–diet associations were largely population-specific, with limited cross-country generalization. Strain-level analyses further uncovered significant genomic differentiation of gut microbes, consistent with localized dietary and ecological differences. Together, these results show that while core microbial responses to healthy eating exist, the structure and function of the human gut microbiome varies strongly with culture, geography, and long-term dietary practices.

Resultado principalLimitación que admiten los autores

Apareció: miércoles, 23 de septiembre. Nature Communications. Revista con revisión por pares.

DOI: 10.1038/s41467-026-77928-9